Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans
- DOI
- Langue de publication
- Anglais
- Date
- 2018-12-01
- Type
- Article
- Auteur(s)
- Wingfield, Brenda D.
- Liu, Miao
- Nguyen, Hai D. T.
- Lane, Frances A.
- Morgan, Seamus W.
- De Vos, Lieschen
- Markus Wilken P.
- Duong, Tuan A.
- Aylward, Janneke
- Coetzee, Martin P. A.
- Dadej, Kasia
- De Beer, Z. Wilhelm
- Findlay, Wendy
- Havenga, Minette
- Kolarík, Miroslav
- Menzies, Jim G.
- Naidoo, Kershney
- Pochopski, Olivia
- Shoukouhi, Parivash
- Santana, Quentin C.
- Seifert, Keith A.
- Soal, Nicole
- Steenkamp, Emma T.
- Tatham, Catherine T.
- van der Nest, Margriet A.
- Wingfield, Michael J.
- Éditeur
- International Mycological Association
Résumé
This genome announcement includes draft genomes from Claviceps purpurea s.lat., including C. arundinis, C. humidiphila and C. cf. spartinae. The draft genomes of Davidsoniella eucalypti, Quambalaria eucalypti and Teratosphaeria destructans, all three important eucalyptus pathogens, are presented. The insect associate Grosmannia galeiformis is also described. The pine pathogen genome of Fusarium circinatum has been assembled into pseudomolecules, based on additional sequence data and by harnessing the known synteny within the Fusarium fujikuroi species complex. This new assembly of the F. circinatum genome provides 12 pseudomolecules that correspond to the haploid chromosome number of F. circinatum. These are comparable to other chromosomal assemblies within the FFSC and will enable more robust genomic comparisons within this species complex.
Résumé en langage clair
Whole genomes of nine ergot fungi were sequenced and assembled. The information will contribute to our understanding of genetic bases of the toxicity and pathogenicity of these important fungi.
Sujet
- Maladie des plantes,
- Champignon
Mots-clés
- Genome sequencing,
- Eucalyptus,
- Fusarium diseases of plants,
- Grasses--Diseases and pests,
- Grain--Diseases and pests,
- Ergotism
Droits
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
Pagination
401-418
Évalué par les pairs
Yes
Niveau de libre accès
Or
Identifiants
- ISSN
- 2210-6359
Article
- Titre de la revue
- IMA Fungus
- Volume de la revue
- 9
- Numéro de revue
- 2
- Date d'acceptation
- 2018-11-26
- Date de soumission
- 2018-11-21
Référence(s)
Wingfield, B. D., Liu, M., Nguyen, H. D. T., Lane, F. A., Morgan, S. W., De Vos, L., Markus W. P., Duong, T. A., Aylward, J., Coetzee, M. P. A., Dadej, K., De Beer, Z. W., Findlay, W., Havenga, M., Kolarík, M., Menzies, J. G., Naidoo, K., Pochopski, O., Shoukouhi, P., Santana, Q. C., Seifert, K. A., Soal, N., Steenkamp, E. T., Tatham, C. T., van der Nest, M. A., & Wingfield, M. J. (2018). Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans. IMA Fungus, 9(2), 401-418. https://doi.org/10.5598/imafungus.2018.09.02.10